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@Genentech

Genentech

Dedicated to pursuing groundbreaking science to discover and develop medicines

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  1. gReLU gReLU Public

    gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

    Python 367 60

  2. SpatialAgent SpatialAgent Public

    A harness for spatial biology

    Python 222 27

  3. equifold equifold Public

    Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation

    Python 131 18

  4. gneprop gneprop Public

    GNEprop is a graph neural network-based model to predict antibacterial activity from molecular structures in virtual screening settings.

    Jupyter Notebook 51 6

  5. scallops scallops Public

    SCALLOPS (Scalable Library for Optical Pooled Screens) is a comprehensive Python package designed to streamline and scale the analysis of Optical Pooled Screens (OPS) for biological data.

    Python 16 5

  6. AssayBench AssayBench Public

    AssayBench: An Assay-Level Virtual Cell Benchmark for LLMs and Agents

    Python 18

Repositories

Showing 10 of 171 repositories
  • scallops Public

    SCALLOPS (Scalable Library for Optical Pooled Screens) is a comprehensive Python package designed to streamline and scale the analysis of Optical Pooled Screens (OPS) for biological data.

    Genentech/scallops's past year of commit activity
    Python 16 5 2 3 Updated Oct 29, 2026
  • DuckDBSpatial Public
    Genentech/DuckDBSpatial's past year of commit activity
    R 2 0 0 0 Updated Oct 29, 2026
  • rdborrow Public

    External Control Borrowing for Rare Disease Simulation and Analysis

    Genentech/rdborrow's past year of commit activity
    R 0 0 13 2 Updated Oct 29, 2026
  • DuckDBGRanges Public
    Genentech/DuckDBGRanges's past year of commit activity
    R 0 0 0 0 Updated Oct 28, 2026
  • PhenoCompass Public
    Genentech/PhenoCompass's past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Oct 28, 2026
  • jmpost Public
    Genentech/jmpost's past year of commit activity
    R 17 4 33 0 Updated Oct 28, 2026
  • CHART Public
    Genentech/CHART's past year of commit activity
    Python 3 MIT 0 0 0 Updated Oct 27, 2026
  • DuckDBArray Public
    Genentech/DuckDBArray's past year of commit activity
    R 0 0 0 0 Updated Oct 26, 2026
  • sclanternR Public
    Genentech/sclanternR's past year of commit activity
    R 1 0 0 0 Updated Oct 26, 2026
  • covtracer Public

    Tools for contextualizing tests, built using covr test traces.

    Genentech/covtracer's past year of commit activity
    R 23 5 10 1 Updated Oct 22, 2026
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