upset-plot

Declarative creation of composable visualization for Python (Complex heatmap, Upset plot, Oncoprint and more~)

Draw UpSet plot to show set data with more than three Intersections. Supports both 'intersect' and 'distinct' modes and large-scale dataset.

Interactive UpSet plots for Plotly Dash.

Interactive UpSet plots for R built on plotly: rich tooltips and one-click copyable intersection details for Quarto, R Markdown, and Shiny. Available on CRAN.

GenoCeptR — An interactive R Shiny application for visualizing and comparing differential gene expression overlaps using 2–5 datasets. Supports CSV/TSV/Excel inputs, automatic column detection, customizable Venn diagrams, and downloadable results.

Publication-ready interactive Venn, Euler, and UpSet diagrams for scientific set analysis.

See where your data overlaps. Beautiful UpSet plots straight from pandas, powered by matplotlib.