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@OpenMS

OpenMS

OpenMS is an open-source software library for LC-MS data management and analysis
README.md

Welcome to @OpenMS!

@OpenMS is an open-source C++ software library for LC-MS data management and analysis with python wrappers (pyOpenMS), a large modular toolset and workflows for e.g., Galaxy, KNIME and nextflow.

Here's how to get started:

All Jobs Status

Repository Status
OpenMS Nightly
workflow
pyOpenMS pyOpenMS Wheels
Documentation Documentation Validation
openms.de Netlify Status
CDash (external server) build status

Pinned Loading

  1. OpenMS OpenMS Public

    The codebase of the OpenMS project

    C++ 629 450

  2. THIRDPARTY THIRDPARTY Public

    External binary dependencies (e.g. search engine binaries) packaged in installers

    2 13

  3. streamlit-template streamlit-template Public

    Python 20 39

  4. pyopenms_viz pyopenms_viz Public

    Streamlining Mass Spectrometry Data Visualization with Pandas

    Jupyter Notebook 26 23

Repositories

Showing 10 of 51 repositories
  • FLASHApp Public
    OpenMS/FLASHApp's past year of commit activity
    Python 1 1 1 14 Updated Nov 3, 2026
  • quantms-web Public
    OpenMS/quantms-web's past year of commit activity
    Python 1 2 1 3 Updated Nov 3, 2026
  • streamlit-template Public
    OpenMS/streamlit-template's past year of commit activity
    Python 20 39 36 34 Updated Nov 3, 2026
  • umetaflow Public

    Graphical user interface for the UmetaFlow pipepline for the analysis of metabolomics LC-MS data.

    OpenMS/umetaflow's past year of commit activity
    Python 12 12 3 7 Updated Nov 3, 2026
  • OpenDIAKiosk Public Forked from OpenMS/streamlit-template

    Data-Independent Acquisition Information and Tools Hub

    OpenMS/OpenDIAKiosk's past year of commit activity
    Python 0 39 3 3 Updated Nov 3, 2026
  • OpenMS Public

    The codebase of the OpenMS project

    OpenMS/OpenMS's past year of commit activity
    C++ 629 450 110 (1 issue needs help) 27 Updated Nov 3, 2026
  • pyopenms_viz Public

    Streamlining Mass Spectrometry Data Visualization with Pandas

    OpenMS/pyopenms_viz's past year of commit activity
    Jupyter Notebook 26 BSD-3-Clause 23 11 (1 issue needs help) 12 Updated Nov 3, 2026
  • homebrew-openms Public

    Homebrew tap for OpenMS (nightly bottles)

    OpenMS/homebrew-openms's past year of commit activity
    Ruby 0 0 0 1 Updated Nov 3, 2026
  • OpenMS-benchmarking Public

    scripts to test how OpenMS performs

    OpenMS/OpenMS-benchmarking's past year of commit activity
    Python 1 0 5 2 Updated Nov 3, 2026
  • OpenMS-website Public

    Hugo sources for the OpenMS website

    OpenMS/OpenMS-website's past year of commit activity
    CSS 0 22 1 6 Updated Nov 2, 2026
View all repositories